Development of a candidate reference material for adventitious virus detection in vaccine and biologicals manufacturing by deep sequencing

  • Edward T. Mee
  • , Mark D. Preston
  • , Philip D. Minor
  • , Silke Schepelmann
  • , Xuening Huang
  • , Jenny Nguyen
  • , David Wall
  • , Stacey Hargrove
  • , Thomas Fu
  • , George Xu
  • , Li Li
  • , Colette Cote
  • , Eric Delwart
  • , Linlin Li
  • , Indira Hewlett
  • , Vahan Simonyan
  • , Viswanath Ragupathy
  • , Alin Voskanian-Kordi
  • , Nicolas Mermod
  • , Christiane Hill
  • Birgit Ottenwalder, Daniel C. Richter, Arman Tehrani, Jacqueline Weber-Lehmann, Jean Pol Cassart, Carine Letellier, Olivier Vandeputte, Jean Louis Ruelle, Fabio La Neve, Avisek Deyati, Chiara Modena, Edward Mee, Mark Preston, Philip Minor, Marc Eloit, Erika Muth, Arnaud Lamamy, Florence Jagorel, Justine Cheval, Cat Anscombe, Raju Misra, David Wooldridge, Saheer Gharbia, Graham Rose, Siemon H.S. Ng, Robert L. Charlebois, Lucy Gisonni-Lex, Laurent Mallet, Fabien Dorange, Charles Chiu

Research output: Contribution to journalArticlepeer-review

33 Citations (Scopus)

Abstract

Background: Unbiased deep sequencing offers the potential for improved adventitious virus screening in vaccines and biotherapeutics. Successful implementation of such assays will require appropriate control materials to confirm assay performance and sensitivity. Methods: A common reference material containing 25 target viruses was produced and 16 laboratories were invited to process it using their preferred adventitious virus detection assay. Results: Fifteen laboratories returned results, obtained using a wide range of wet-lab and informatics methods. Six of 25 target viruses were detected by all laboratories, with the remaining viruses detected by 4-14 laboratories. Six non-target viruses were detected by three or more laboratories. Conclusion: The study demonstrated that a wide range of methods are currently used for adventitious virus detection screening in biological products by deep sequencing and that they can yield significantly different results. This underscores the need for common reference materials to ensure satisfactory assay performance and enable comparisons between laboratories.
Original languageEnglish
Pages (from-to)2035-2043
Number of pages9
JournalVaccine
Volume34
Issue number17
DOIs
Publication statusPublished - 12 Apr 2016
Externally publishedYes

Keywords

  • Adventitious virus
  • Collaborative study
  • Deep sequencing
  • Reference material
  • Vaccine

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